FRpred

Input

or upload a local file
Select input mode
 single FASTA sequence   alignment  
Select alignment format
 
 

PSI-BLAST Options

Max. number of iterations
E-value threshold
 

FRpred Options

 

Job Options

Job-ID
 (leave empty for automatic creation)
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Mihalek, I., Res, I., and Lichtarge, O. (2004) A Family of Evolution-Entropy Hybrid Methods for Ranking Protein Residues by Importance. J. Mol. Biol., 336 (5), 1265-1282.
Hannenhalli, S.S., and Russel, R.B. (2000) Analysis and Prediction of Functional Sub-types from Protein Sequence Alignments. J. Mol. Biol., (1), 61-76.
Altschul, S., Madden, T., Schaffer, A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucl. Acids Res., 25 (17), 3389-3402.
Kabsch, W., and Sander C. (1983) Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features. Biopolymers., 22 (12), 2577-2637.
Adamczak R., Porollo A., Meller J. (2004) Accurate prediction of solvent accessibility using neural networks-based regression. Proteins., 56 (4), 753-767.